Shed some light on plant signaling
PlantPSD is an online resource containing manually-curated details from the plant PubMed literature in a highly structured and easily searchable format. This powerful query system, with specialized tools for gene set analysis and pathway visualization, allows scientists to quickly find answers to questions important for their research – without performing a lengthy literature search, thus saving time and facilitating better research decisions.
A subscription to PlantPSD (in BKL PROTEOME) provides you with:
- Manually curated literature for Arabidopsis, rice, maize, soybean, and sorghum, organized in a one-protein-per-report format
- Searchable access to functional assignments in our Ontology tool providing the ability to:
- Find proteins with shared characteristics such as mutant phenotypes, expression, and molecular function
- Map functional attributes to your uploaded gene sets
- Analyse gene sets for statistical over-representation of specific characteristics
- A visualization tool for building custom networks using experimentally demonstrated protein-protein binding and signaling interactions
- Seamless access to the same detailed, high-quality information for closely related yeast, mammalian, and worm proteins, providing comparative systems to enhance your research on nutrition, biofuels, and crop science.
Your Advantage
Find networks key to desired traits with access to the latest knowledge on pathways, mutations, and protein function:
- 730,000 protein attribute assignments
- 125,000 Promoters
- Over 100 species represented with full genome coverage of Arabidopsis, rice, soybean, and sorghum
To learn more about this product, access statistics, read a user publication, or sign up for a free trial.
Focus
Save time with easily accessible, up-to-date, expertly curated information from the published literature at your fingertips:
- Gene Ontology characterizations
- Expression patterns and mutant phenotypes
- Signal transduction and metabolic pathways
Covering a wide range of plant journals.
Includes interactions, modifications, and other signaling events for species like Arabidopsis, rice, maize, soybean, tomato, tobacco, and more!
Understand
Make sense of your high throughput datasets with advanced analysis tools:
- Perform functional analyses on large datasets
- Build pathways and networks
- Look for enrichment in your gene sets
Tour the ExPlain Analysis System to learn about the concept behind this analysis tool.
Biology Simplified
Make sense of your high throughput data with our Ontology Search tool that lets you find proteins with shared characteristics and allows functional analysis of experimental gene sets.
- Perform virtual experiments
- Find overrepresented processes, phenotypes, or gene families in your dataset
- Uncover interaction networks
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